[Rosetta@Home] hitparade van 30 juli

[trenza]

We kijken naar de statistieken van 30 juli 2006. En wat valt het eerste op?
Er is weer een nieuweling in de wei. Op plaats 111 in de daily vinden we Leon. Welkom!
Ook gaat er een felicitatie de deur uit. Canth haalt namelijk de 20.000 mijlpaal.
116 Teams droegen weer hun steentje bij aan de dagscore van 147.732,00 voor DPC. Een gemiddelde van 1.273,55 punten per team. Geen enkel team zat rond dit gemiddelde. Het steentje van Enrico was het kleinste, dan de steentjes van de andere 115 flushers met de grootste steen vandaag door [DPC]FOKschaap. Maar alle steentjes tellen gelukkig mee.

In de overall is Creative ID hard op weg naar de top 30. Vandaag is hij alvast verhuisd naar de 31 plaats. Ook onder andere Markosoft, paraiko, Chris, evert_, jfTK, [DPC]Acidfire, Indy31 en Zonnet hadden genoeg van hun oude plekje en zochten het hoger op.

Kortom, er is weer genoeg te beleven. Hier zijn de cijfertjes van de
[Rosetta@Home] hitparade van 30 juli 2006

Subteams Daily Top 30
pos		daily	user	total		procent
1.	()	31.828,80	[DPC]FOKschaap	5.116.496,87	(1)	21,5 %
2.	()	17.418,70	Cureseekers	4.994.521,02	(2)	11,8 %
3.	( 1)	7.769,02	[DPC]TeamHC	1.085.119,40	(8)	5,3 %
4.	( 1)	6.886,22	Mbc	392.573,63	(19)	4,7 %
5.	( 1)	6.426,46	Grutte Pier [Wa Oars]	2.365.409,26	(4)	4,3 %
6.	( 1)	5.794,17	[DPC] Team ColdFusion	1.456.991,61	(6)	3,9 %
7.	()	4.065,82	Los Alcoholicos	3.543.506,56	(3)	2,8 %
8.	()	3.862,42	DPC_Schotse_Hooglanders	345.797,56	(23)	2,6 %
9.	( 17)	3.673,00	evert_	96.127,91	(57)	2,5 %
10.	( 10)	3.509,67	Dutch Power Chicken	466.104,17	(16)	2,4 %
11.	( 1)	3.246,31	Patman	369.008,41	(21)	2,2 %
12.	( 2)	2.693,68	Creative ID	194.676,87	(31)	1,8 %
13.	( 4)	2.655,56	Team_Gaol	964.979,53	(9)	1,8 %
14.	( 3)	2.638,73	borkescomputers	630.558,73	(13)	1,8 %
15.	( 2)	2.335,82	Basjes	190.391,22	(33)	1,6 %
16.	( 1)	2.162,75	Lmax	43.360,52	(93)	1,5 %
17.	( 5)	2.153,96	Tukkertje	496.492,04	(15)	1,5 %
18.	( 2)	2.096,26	Markosoft	176.776,94	(35)	1,4 %
19.	( 2)	1.811,32	MolAnO	295.721,07	(25)	1,2 %
20.	( 1)	1.605,72	Da_Bink	224.313,42	(28)	1,1 %
21.	( 2)	1.458,91	NoizyCows	508.413,83	(14)	1,0 %
22.	( 5)	1.356,44	[DPC]Division_Brabant	449.209,23	(18)	0,9 %
23.	( 1)	1.348,15	Indy31	80.008,04	(70)	0,9 %
24.	( 12)	1.310,37	paraiko	137.249,49	(46)	0,9 %
25.	( 7)	1.307,44	Chris	112.405,64	(52)	0,9 %
26.	( 1)	1.300,45	TeamBVD	701.243,72	(12)	0,9 %
27.	( 5)	1.213,42	Team_Elteor_Borislavj	2.051.175,50	(5)	0,8 %
28.	()	1.204,20	jfTK	91.452,44	(59)	0,8 %
29.	( 6)	1.203,26	Fiestaclub.nl	174.809,73	(37)	0,8 %
30.	()	1.193,95	MadMarky	138.389,04	(45)	0,8 %
More...

Subteams Overall Top 30
pos		overall	user	daily		procent
1.	()	5.116.496,87	[DPC]FOKschaap	31.828,80	(1)	12,3 %
2.	()	4.994.521,02	Cureseekers	17.418,70	(2)	12,0 %
3.	()	3.543.506,56	Los Alcoholicos	4.065,82	(7)	8,5 %
4.	()	2.365.409,26	Grutte Pier [Wa Oars]	6.426,46	(5)	5,7 %
5.	()	2.051.175,50	Team_Elteor_Borislavj	1.213,42	(27)	4,9 %
6.	()	1.456.991,61	[DPC] Team ColdFusion	5.794,17	(6)	3,5 %
7.	()	1.406.168,92	BurnHard	507,36	(43)	3,4 %
8.	()	1.085.119,40	[DPC]TeamHC	7.769,02	(3)	2,6 %
9.	()	964.979,53	Team_Gaol	2.655,56	(13)	2,3 %
10.	()	940.944,20	MetalMike	196,99	(65)	2,3 %
11.	()	756.550,34	[DPC]Team Switch	0,00	(155)	1,8 %
12.	()	701.243,72	TeamBVD	1.300,45	(26)	1,7 %
13.	()	630.558,73	borkescomputers	2.638,73	(14)	1,5 %
14.	()	508.413,83	NoizyCows	1.458,91	(21)	1,2 %
15.	()	496.492,04	Tukkertje	2.153,96	(17)	1,2 %
16.	()	466.104,17	Dutch Power Chicken	3.509,67	(10)	1,1 %
17.	()	461.255,02	Cosmic Cows	1.101,58	(31)	1,1 %
18.	()	449.209,23	[DPC]Division_Brabant	1.356,44	(22)	1,1 %
19.	()	392.573,63	Mbc	6.886,22	(4)	0,9 %
20.	()	380.651,91	AJSL	0,00	(226)	0,9 %
21.	()	369.008,41	Patman	3.246,31	(11)	0,9 %
22.	()	355.465,70	JZ-power	535,92	(42)	0,9 %
23.	()	345.797,56	DPC_Schotse_Hooglanders	3.862,42	(8)	0,8 %
24.	()	332.529,80	M_P_G	0,00	(159)	0,8 %
25.	()	295.721,07	MolAnO	1.811,32	(19)	0,7 %
26.	()	261.699,10	[DPC]NGS	0,00	(459)	0,6 %
27.	()	240.462,49	trenza	966,30	(34)	0,6 %
28.	()	224.313,42	Da_Bink	1.605,72	(20)	0,5 %
29.	()	211.059,36	[DPC] de7geitjes	578,34	(41)	0,5 %
30.	()	197.525,52	Selwerd	0,00	(162)	0,5 %
More...

Teams Daily Top 15
pos		daily	team	total		procent
1.	()	522.949,00	XtremeSystems	61.011.571,06	(1)	18,1 %
2.	()	414.556,00	Team Starfire World BOINC	414.556,06	(99)	14,3 %
3.	( 1)	181.843,00	Free-DC	48.182.846,27	(2)	6,3 %
4.	( 1)	147.732,00	Dutch Power Cows	41.799.730,40	(3)	5,1 %
5.	( 1)	98.149,00	TeAm AnandTech	21.704.179,60	(4)	3,4 %
6.	( 1)	76.173,10	SETI.USA	5.615.112,00	(13)	2,6 %
7.	( 1)	62.775,90	Team MacNN	6.013.046,18	(11)	2,2 %
8.	( 1)	45.882,30	Canada	8.833.575,11	(6)	1,6 %
9.	( 1)	41.805,50	Ars Technica	7.863.982,11	(7)	1,4 %
10.	( 1)	40.700,90	US-Distributed	7.363.045,25	(8)	1,4 %
11.	( 1)	36.365,50	BOINC Synergy	6.091.180,61	(10)	1,3 %
12.	( 1)	35.699,50	XPC	14.074.152,74	(5)	1,2 %
13.	( 1)	35.285,50	Rechenkraft.net	4.052.985,73	(17)	1,2 %
14.	( 1)	33.377,10	Teddies	5.267.972,84	(14)	1,2 %
15.	( 1)	28.691,50	BOINC@Austria	2.272.715,48	(27)	1,0 %
More...

Teams Overall Top 15
pos		overall	team	daily		procent
1.	()	61.011.571,06	XtremeSystems	522.949,00	(1)	15,0 %
2.	()	48.182.846,27	Free-DC	181.843,00	(3)	11,8 %
3.	()	41.799.730,40	Dutch Power Cows	147.732,00	(4)	10,2 %
4.	()	21.704.179,60	TeAm AnandTech	98.149,00	(5)	5,3 %
5.	()	14.074.152,74	XPC	35.699,50	(12)	3,5 %
6.	()	8.833.575,11	Canada	45.882,30	(8)	2,2 %
7.	()	7.863.982,11	Ars Technica	41.805,50	(9)	1,9 %
8.	()	7.363.045,25	US-Distributed	40.700,90	(10)	1,8 %
9.	()	6.688.348,95	Phoenix Rising	6.527,71	(57)	1,6 %
10.	()	6.091.180,61	BOINC Synergy	36.365,50	(11)	1,5 %
11.	()	6.013.046,18	Team MacNN	62.775,90	(7)	1,5 %
12.	()	5.895.887,52	Housing and Food Services	15.048,60	(30)	1,4 %
13.	()	5.615.112,00	SETI.USA	76.173,10	(6)	1,4 %
14.	()	5.267.972,84	Teddies	33.377,10	(14)	1,3 %
15.	()	5.055.349,97	Czech National Team	21.839,60	(23)	1,2 %
More...

Mijlpalen
user	mijlpaal
canth	20.000

When do we reach the 42.000.000?
We will reach this goal in 1 day.

When do we get them...
nobody

When do they get us...
days	team
63	BOINC.Italy

New members
Leon

Rosetta@home Links
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Bron

[Kristof]

Buiten het statsnieuws dat onze gezegende statsposter wist te vertellen, is er nog een berg projectnieuws. Allereerst een bericht in het journal van David Baker:

I just returned from our annual Rosetta developers meeting. It was a tremendous success! There were 70 people attending from all over the country and some came all the way from Europe to the conference center in the Washington Cascades.

We discussed improvements in the basic methodology in Rosetta made in the different research groups, and some of the exciting scientific advances as well. It was a terrific opportunity to get caught up and to learn about all the new capabilities created by the extended Rosetta developers community. We also discussed how to continue to keep the program intact and cohesive with all of the changes being made in so many different places all of the time (those of you who are programmers will certainly appreciate this challenge).

The meeting was also a great opportunity for beginning students in the different research groups from different institutions to meet each other and the people who have been working on developing rosetta for several years. And for those of us who have been around for a bit longer, it was a great opportunity to see old friends!

My only disappointment was that I had to skip the traditionall hike/climb following the meeting because of a knee still not fully recoved from a previous trip.

Daarnaast vroeg een user zich af, wat er zal verwerkt worden nadat de berekeningen voor CASP7 afgerond zijn. David wist hetvolgende erover te vertellen:

We have a long list we are excited to get to when CASP is over. first on the list are improvements to the basic method suggested by our observations on the CASP targets. these will be tested on the CASP proteins whose structure has been solved and the proteins in our previous test set. it was really useful to look at rosetta models for the larger casp proteins--there were some clear aspects to improve.
Second, we want to get the HIV vaccine design calculations running ASAP; with the Gates foundation funding we have funds to support testing of quite a number of designs as possible vaccines and we are eager to get going with this! Third, there are other modeling projects in the group, such as predicting the structures of the amyloid fibers implicated in many human diseases we would like to start running as well.

En werd aangevuld door BennyRop:

Prior to CASP, Rosetta was working on improvements to the modelling ability of the Rosetta client, and a number of things that dramatically reduced the bandwidth used by the client.

After CASP is over, we'll be helping out with improving the client again.

We've been creating 100,000 decoys/models for some/all of the CASP targets; and one of the ideas that we didn't get to test out was creating 10,000 decoys/models, and then with the data from the first 10k decoys/models, create a new target that includes data from the first 10k models so that the second run of 10k models will be relatively fast, and produce decoys/models as accurate as we're getting now with 100,000 decoys/models. (i.e. produce 20k models instead of 100k..) They'll try new approaches - some which will be improvements, some that won't. They'll see certain types of proteins or types of protein structures the Rosetta client doesn't work as well with - and test out new ideas on how to create accurate predictions for those types of proteins/protein structures.

The more this client is improved, the better it'll be at helping find a cure or treatment for the ailments it'll be targetted with in the future.

Casp is a competition to see how well the various scientists involved in protein structure prediction are at predicting proteins of an unknown shape. (The structure of the proteins are known, but unpublished until after the Casp competition.) When Casp is over, we'll go back to working on proteins with published structures.

Zoals je ziet, zal er werk genoeg zijn, dus geef je koetjes maar genoeg krachtvoer

[ Voor 96% gewijzigd door Kristof op 31-07-2006 08:36 ]

[DexterBelgium]

Om het paard terug vóór de kar te krijgen (en dus de volgorde van de DPCHen niet volledig in de war te sturen): proficiat canth, welkom Leon

[archetta]

mooi, ik kan toch nog even de stats bekijken voordat ik ga werken

[TheZoo]

trenza schreef op maandag 31 juli 2006 @ 08:21:
116 Teams droegen weer hun steentje bij aan de dagscore van 147.732,00 voor DPC. Een gemiddelde van 1.273,55 punten per team. Geen enkel team zat rond dit gemiddelde.

Tis natuurlijk maar net hou je "rond" definiëert